Masafumi Shimizu, Satoshi Sasaki and Masataka Kinjo

Triplet Fraction Buildup Effect of the DNA-YOYO Complex Studied with Fluorescence Correlation Spectroscopy. 

Analytical Biochem.,366(1), 87-92, (2007)

 

Yoichi Araki, Takanori Kawano, Hidenori Taru, Yuhki Saito, Sachiyo Wada, Kanako Miyamoto, Hisako Kobayashi, Hiroyuki O. Ishikawa, Yu Ohsugi, Tohru Yamamoto, Kenji Matsuno, Masataka Kinjo, and Toshiharu Suzuki

“The novel cargo Alcadein induces vesicle association of kinesin-1 motor components and activates axonal transport.” 

EMBO J, 26, 1475–1486 (2007)

 

Shintaro Mikuni, Changi Pack, Mamoru Tamura and Masataka Kinjo

“Diffusion analysis of glucocorticoid receptor and antagonist effect in living cell nucleus.”

Exp. Mol. Pathol, 82(2), 163-168, (2007)

 

Shintaro Mikuni, Mamoru Tamura and Masataka Kinjo

“Analysis of intranuclear binding process of glucocorticoid receptor using fluorescence correlation spectroscopy.”

FEBS Letters581, 389-393, (2007)

 

Hiroaki Kii, Takuya Takagi, Akira Sasaki, Takaharu Okajima, and Masataka Kinjo

“DNA Microstructure Based on Self-Assembly of 4-Sticky-End Holiday Junctions in Aqueous Solution.”

Journal of Nanoscience and Nanotechnology 7, 726–729 (2007)

 

Yasutomo Nomura, Hirobumi Fuchigami, Hiroaki Kii, Zhonggang Feng, Takao Nakamura and Masataka Kinjo

“Direct quantification of gene expression using fluorescence correlation spectroscopy”

in press Current Pharmaceutical Biotechnology. (2006)

 

Y. Nomura, H. Fuchigami, H. Kii, Z. Feng, T. Nakamura and M. Kinjo

“Quantification of size distribution of restriction fragments in mitochondrial genome using fluorescence correlation spectroscopy”

Exp. Mol. Pathol, 80(3) : 275-278 (2006)

 

Rieko Oyama, Hideaki Takashima, Masato Yonezawa, Nobuhide Doi,, Etsuko Miyamoto-Sato, Masataka Kinjo and Hiroshi Yanagawa*.

“Protein–protein interaction analysis by C-terminally specific fluorescence labeling and fluorescence cross-correlation spectroscopy.”

Nucleic Acids Research,  Vol. 34, No. 14 e102 (2006)

 

Y. Ohsugi and Masataka Kinjo*

“Analysis of membrane-binding protein mobility in living cells using total internal reflection fluorescence correlation spectroscopy”

Biophysical Reviews and Letters, Vol. 1, No. 3, 293-299 (2006)

 

Hiroki Konno, Tomoe Murakami, Fumihiko Fujii, Fumie Koyama, Hanayo Ueoka-Nakanishi, Chan-Gi Pack, Masataka Kinjo, and Toru Hisabori*,

“The regulator of the F1 motor: Inhibition of rotation of cyanobacterial F1-ATPase by the ε subunit.”

EMBO J., 4596 - 4604 (2006)

 

Akira Kitamura, Hiroshi Kubota, Chan-Gi Pack, Gen Matsumoto, Shoshiro Hirayama, Yasuo Takahashi, Hiroshi Kimura, Masataka Kinjo, Richard I. Morimoto and Kazuhiro Nagata*. “Cytosolic chaperonin prevents polyglutamine toxicity with altering the aggregation state”

Nature Cell Biology, 8(10):1163-1169 (2006)

 

Changi Pack, Kenta Saito, Mamoru Tamura, and Masataka Kinjo*

“Microenvironment and effect of energy depletion in the nucleus analyzed by mobility of multiple oligomeric EGFPs.”

Biophys J. vol 91, 10 (2006)

 

Shigeko Kawai-Noma Satoru Ayano, Chan-Gi Pack, Masataka Kinjo, Masasuke Yoshida, Kenji Yasuda and Hideki Taguchi*.  

“Dynamics of yeast prion aggregates in single living cells.” 

Genes to Cells 11, 1085–1096, (2006)

 

Jin T*, Fujii F, Yamada E, Yoshinobu Nodasaka and Masataka Kinjo

“Control of the optical properties of quantum dots by surface coating with calix[n]arene carboxylic acids”

J Am. Chem. Soc. 128 (29): 9288-9289 (2006)

 

Yu Ohsugi, Kenta Saito, Mamoru Tamura and Masataka Kinjo*

“Lateral Mobility of Membrane-Binding Proteins in Living Cells Measured by Total Internal Reflection Fluorescence Correlation Spectroscopy.”  

Biophys J. 91, 9 3456–3464 (2006)

 

Hideki Muto, Issei Nagao, Taku Demura, Hiroo Fukuda, Masataka Kinjo, and Kotaro T. Yamamoto*. 

“Fluorescence cross-correlation analyses of molecular interaction between an Aux/IAA protein, MSG2/IAA19, and protein-protein interaction domains of auxin response factors of Arabidopsis expressed in HeLa cells”

Plant Cell Physiol., 47, 1095-1101, (2006)

 

Takako Kogure, Satoshi Karasawa, Toshio Araki, Kenta Saito, Masataka Kinjo, and Atsushi Miyawaki* 

“A fluorescent variant of a protein from the stony coral Montipora facilitates dual-color single-laser fluorescence cross-correlation spectroscopy.”

Nat Biotechnol 30, 577 - 581 (2006).

 

Yasutomo Nomura*, Hirobumi Fuchigami, Hiroaki Kii, Zhonggang Feng, Takao Nakamura and Masataka Kinjo.

“Detection of oxidative stress-induced mitochondrial DNA damage using fluorescence correlation spectroscopy.”

Anal. Biochem, 350, 196-201 (2006)

 

Goro Nishimura and Masataka Kinjo 

“Dead-time distortion in fluorescence correlation measurements”

Applied Optics, 44 : 3458-3467 (2005)

 

Maya Hirose, Hideki Tohda, Yuko Giga-Hama, Reiko Tsushima, Tamotsu Zako, Ryo Iizuka, Changi Pack, Masataka Kinjo, Noriyuki Ishii, and Masafumi Yohda*

“Interaction of a small heat shock protein of the fission yeast, Schizosaccharomyces pombe, with a denatured protein at elevated temperature.”

J. Biol. Chem;280, 32586-32593 (2005)

 

Takashi Jin*, Fumihiko Fujii, Hiroshi Sakata, Mamoru Tamura and Masataka Kinjo

“Amphiphilic p-sulfonatocalix[4]arene-coated CdSe–ZnS quantum dots for the optical detection of the neurotransmitter acetylcholine.”

Chem. Commun. 4300-4302 (2005)

 

Takashi Jin, Fumihiko Fuji, Hiroshi Sakata, Mamoru Tamura and Masataka Kinjo 

“Calixarene-coated water-soluble CdSe-ZnS semiconductor quantum dots that are higly fluorescenet and stable in aqueous solution”

Chemical Communications : 2829-2831 (2005)

 

Yasuo Takahashi, Ryuji Sawada, Kiyochika Ishibashi, Sintarou Mikuni and Masataka Kinjo*

“Analysis of Cellular Functions by Multipoint Fluorescence Correlation Spectroscopy”

Current Pharmaceutical Biotechnology, 6, 156-159 (2005),

 

Akiko Masuda, Kiminori Ushida, Goro Nishimura, Masataka Kinjo, and Mamoru Tamura, Hiroyuki Koshino, Koichi Yamashita, and Thomas Kluge*

“Experimental evidence of distance-dependent diffusion coefficients of a globular protein observed in polymer aqueous solution forming a network structure on nanometer scale.” 

J.Chem. Phys 121.10787-10793 (2004)

 

Yasutomo Nomura*, and Masataka Kinjo

“Real–time monitoring of in vitro transcriptional RNA using fluorescence correlation spectroscopy.” 

ChemBioChem 5, 1701-1703 (2004)

 

Kenta Saito; Ikuo Wada; Mamoru Tamura and Masataka Kinjo*

“Direct detection of caspase-3 activation in single live cells by cross-correlation analysis.” 

Biochem. Biophys. Res. Comm 324/2, 849-854 (2004)

 

Takuya Takagi, Hiroaki Kii and Masataka Kinjo*

“DNA Measurements by Using Fluorescence Correlation Spectroscopy and Two-Color Fluorescence Crosscorrelation Spectroscopy”

Current Pharmaceutical Biotechnology, 5, 199-204, (2004)

 

Asako Kamada, Hisao Nagaya, Taku Tamura, Masataka Kinjo, Hai-Ying Jin, Toshiharu Yamashita1, Kowichi Jimbow, Hideo Kanoh and Ikuo Wada*

“Regulation of immature protein dynamics in the endoplasmic reticulum”

J Biol Chem 279, 21533-21542 (2004)

 

Goro Nishimura* and Masataka Kinjo

“Systematic Error in Fluorescence Correlation Measurements Identified by a Simple Saturation Model of Fluorescence”

Analytical Chem 76, 1963-1970 (2004)

 

Z. Foldes-Papp, J. M. Costa, U. Demel, G. P. Tilz, M. Kinjo, K. Saito, H. Kii, T. Takagi, M. Tamura, P. Thyberg and E. Birch-Hirschfeld 

“Specifically associated PCR products probed by coincident detection of two-color cross-correlated fluorescence intensities in human gene polymorphisms of methylene tetrahydrofolate reductase at site C677T: a novel measurement approach without follow-up mathematical analysis”

Exp. Mol. Pathol., 76(3) : 212-218 (2004)

 

K. Watanabe, K. Saito, M. Kinjo, T. Matsuda, M. Tamura, S. Kon, T. Ueda and T. Miyazaki

“Molecular dynamics of STAT3 on IL-6 signaling pathway in living cells”

Biochem. Biophys. Res. Comm , 324 : 1264-1273 (2004)

 

Goro Nishimura*A and Masataka Kinjo:

“Multi-Photon Fluorescence Correlation Spectroscopy: a Quantification of Tryptophan Methylester Solutions by Visible Emission.”

Optical Review Vol. 10, No. 6 (2003) 588-591

 

Z. Foldes-Papp, M. Kinjo, K. Saito, H. Kii, T. Takagi, M. Tamura, J. M. Costa, E. Birch-Hirschfeld, U. Demel, P. Thyberg and G. P. Tilz

“C677T Single Nucleotide Polymorphisms of the Human Methylene Tetrahydrofolate Reductase and Specific Identification A Novel Strategy Using Two-Color Cross-Correlation Fluorescence Spectroscopy”

Molecular Diagnosis: 7 (1): 99-111. (2003)

 

Nobuhiko Tokuriki, Masataka Kinjo, Shigeru Negi, Masaru Hoshino, Yuji Goto, Itaru Urabe, and Tetsuya Yomo*

“Protein Folding by the Effects of Macromolecular Crowding”

Protein Science 13, 125–133 (2003)

 

Goro Nishimura* and Masataka Kinjo

“Visible Emission of a Photoproduct from Tryptophan Solution Induced by Multiphoton Excitation: An Investigation by Intensity Fluctuation Analysis.”

J. Phys. Chem. B, 107 (24), 6012 -6017, (2003)

 

Kenta Saito, Eiko Ito, Yuichi Takakuwa, Mamoru Tamura and Masataka Kinjo*

“In situ observation of mobility and anchoring of PKCI in plasma membrane,”

FEBS Letters, 541, 126-131 (2003)

 

Y. Takahashi, N. Bark, M. Kinjo and R. Rigler 

“Fluorescence Correlation Spectroscopy (FCS) Analysis of Human Red Blood Cell System”

OPTICAL REVIEW, 10(6) : 596-599 (2003)

 

N. Doi, H. Takashima, M. Kinjo, K. Sakata, Y. Kawahashi, Y. Oishi, R. Oyama, E. Miyamoto-Sato, T. Sawasaki, Y. Endo and H. Yanagawa

“Novel Fluorescence Labeling and High-Throughput Assay Technologies for In Vitro Analysis of Protein Interactions”

Genome Res. 12: 487-492 (2002)

 

T. Muto, K. Saito, M. Tamura and M. Kinjo

“Microenvironment Analysis in Squid Axons using Fluorescence Correlation Spectroscopy and Laser Scanning Microscopy”

Acta Histochem Cytochem , 35 : 87-91 (2002)

 

M. Kinjo

“Detection of Asymmetric PCR Products by FCS”(1999)

 

C. Pack, G. Nishimura, M. Tamura, K. Aoki, H. Takuchi, M. Yoshida, and M. Kinjo

“Analysis of interaction between chaperonin GroEL and its substrate using fluorescence correlation spectroscopy”

Cytometry Vol. 36: p 247-253 (1999)

 

M. Kinjo, G. Nishimura, T. Koyama, U. Mets and R. Rigler

“Single Molecule Analysis of Restriction DNA Fragment using FCS” (1998)

 

G. Nishimura and M. Kinjo

“Monitor of DNA Cutting and Application for RFLP” (1998)

 

M. Kinjo

“Quantitaive Analysis of PCR using FCS” (1997)

 

M Kinjo and R Rigler

“Ultrasensitive hybridization analysis using fluorescence correlation spectroscopy.”

Nucleic Acid Rec. 23 (10) 1795-1799 (1995)